BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B02SP1|AL424902
(1007 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1694 1972 0.0
3x_Contig951 795 0.0
3x_Contig1324 276 7e-74
>3x_Contig1694
Length = 18020
Score = 1972 bits (994), Expect = 0.0
Identities = 1005/1008 (99%), Gaps = 1/1008 (0%)
Strand = Plus / Plus
Query: 1 gatcccattcctaagattgagattgagacctgaagaagaagaattgggtactgatgaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11143 gatcccattcctaagattgagattgagacctgaagaagaagaattgggtactgatgaagc 11202
Query: 61 tgaaattggtgaattcacctacgaagaagacgctgtctacattccagaaccaatcagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11203 tgaaattggtgaattcacctacgaagaagacgctgtctacattccagaaccaatcagatc 11262
Query: 121 caaatccatcgctgaagctcctccagcaaacatcgatgacaagattcacacaggaaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11263 caaatccatcgctgaagctcctccagcaaacatcgatgacaagattcacacaggaaacaa 11322
Query: 181 ctcttcatcagaactacaatctgaaccaaaaactacttccgctaatgcctaaactttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11323 ctcttcatcagaactacaatctgaaccaaaaactacttccgctaatgcctaaactttatt 11382
Query: 241 aatgtaataattttggttttgcaaatttcagaaactgcaattacacgaaatgttctttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11383 aatgtaataattttggttttgcaaatttcagaaactgcaattacacgaaatgttctttta 11442
Query: 301 ttatctgctttcagctgctaattgtaaccgttaaccctgattttactggtgaatcattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11443 ttatctgctttcagctgctaattgtaaccgttaaccctgattttactggtgaatcattct 11502
Query: 361 aaacttcatttattcatttcaagctaacaccagttcacaccaaagtttggaaaggagatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11503 aaacttcatttattcatttcaagctaacaccagttcacaccaaagtttggaaaggagatc 11562
Query: 421 tacttctagccgtcttatgtgttcagtaatatctagttcctaatatgacacttatgtacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11563 tacttctagccgtcttatgtgttcagtaatatctagttcctaatatgacacttatgtacc 11622
Query: 481 acaataattaataacgaatctctcataaatccctttgttgtatagccattcacgaccttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11623 acaataattaataacgaatctctcataaatccctttgttgtatagccattcacgaccttt 11682
Query: 541 gtatcaggtttggcgttcgtctagttgctgctatgagattccctccaaatccgggtaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11683 gtatcaggtttggcgttcgtctagttgctgctatgagattccctccaaatccgggtaata 11742
Query: 601 taaacaagtaagacgttaaattcagcatctgatagaataatcgatataacttgagtgaaa 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 11743 taaacaagtaagacgttaaattcagcatctgatagaataatcgatataacttgagtaaaa 11802
Query: 661 tcctcatcggtttgagtagtgttaccgactctaaccagcgcttcaagagaccaaggtata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11803 tcctcatcggtttgagtagtgttaccgactctaaccagcgcttcaagagaccaaggtata 11862
Query: 721 taaagggtaactaaggtctaatatgagtaaagagcaacgtgattcgagaaagactcaact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11863 taaagggtaactaaggtctaatatgagtaaagagcaacgtgattcgagaaagactcaact 11922
Query: 781 atggaagatcaatctatggaagatctggtatgcagttaacattccaatcattacgttttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11923 atggaagatcaatctatggaagatctggtatgcagttaacattccaatcattacgttttt 11982
Query: 841 ggattcgaatgcagtacttcctccatatcttcaatatactaagggacttctagatggtta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11983 ggattcgaatgcagtacttcctccatatcttcaatatactaagggacttctagatggtta 12042
Query: 901 tattgataatttcaatgattttctaactgccaatcctccaaactggctcaaatatatgac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12043 tattgataatttcaatgattttctaactgccaatcctccaaactggctcaaatatatgac 12102
Query: 961 aatcattgaaattttattcc-actgcctgtggscatatattgcttata 1007
|||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 12103 aatcattgaaattttattccaactgcctgtggccatatattgcttata 12150
>3x_Contig951
Length = 2832
Score = 795 bits (401), Expect = 0.0
Identities = 401/401 (100%)
Strand = Plus / Plus
Query: 1 gatcccattcctaagattgagattgagacctgaagaagaagaattgggtactgatgaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2432 gatcccattcctaagattgagattgagacctgaagaagaagaattgggtactgatgaagc 2491
Query: 61 tgaaattggtgaattcacctacgaagaagacgctgtctacattccagaaccaatcagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2492 tgaaattggtgaattcacctacgaagaagacgctgtctacattccagaaccaatcagatc 2551
Query: 121 caaatccatcgctgaagctcctccagcaaacatcgatgacaagattcacacaggaaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2552 caaatccatcgctgaagctcctccagcaaacatcgatgacaagattcacacaggaaacaa 2611
Query: 181 ctcttcatcagaactacaatctgaaccaaaaactacttccgctaatgcctaaactttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2612 ctcttcatcagaactacaatctgaaccaaaaactacttccgctaatgcctaaactttatt 2671
Query: 241 aatgtaataattttggttttgcaaatttcagaaactgcaattacacgaaatgttctttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2672 aatgtaataattttggttttgcaaatttcagaaactgcaattacacgaaatgttctttta 2731
Query: 301 ttatctgctttcagctgctaattgtaaccgttaaccctgattttactggtgaatcattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2732 ttatctgctttcagctgctaattgtaaccgttaaccctgattttactggtgaatcattct 2791
Query: 361 aaacttcatttattcatttcaagctaacaccagttcacacc 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2792 aaacttcatttattcatttcaagctaacaccagttcacacc 2832
>3x_Contig1324
Length = 5803
Score = 276 bits (139), Expect = 7e-74
Identities = 196/215 (91%)
Strand = Plus / Plus
Query: 1 gatcccattcctaagattgagattgagacctgaagaagaagaattgggtactgatgaagc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5511 gatcccattcctaagattgagattgagacctgaagaagaagaattgggtactgatgaagt 5570
Query: 61 tgaaattggtgaattcacctacgaagaagacgctgtctacattccagaaccaatcagatc 120
|||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 5571 tgaaattggtgaattcacctacgaagaagatgctgtctacatcccagagccaatcagatc 5630
Query: 121 caaatccatcgctgaagctcctccagcaaacatcgatgacaagattcacacaggaaacaa 180
||||||||||||||||||||| |||||| ||| || ||||| | || ||||||||||
Sbjct: 5631 caaatccatcgctgaagctcccgcagcaatcattgacgacaaagtccaaacaggaaacag 5690
Query: 181 ctcttcatcagaactacaatctgaaccaaaaacta 215
|||||| ||||| |||||||||||||||||||
Sbjct: 5691 ttcttcagaggaactccaatctgaaccaaaaacta 5725
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8822
Number of Sequences: 1807
Number of extensions: 8822
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 3
length of query: 1007
length of database: 10,358,551
effective HSP length: 16
effective length of query: 991
effective length of database: 10,329,639
effective search space: 10236672249
effective search space used: 10236672249
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)